EYA1

EYA1
Identifiers
Aliases	EYA1, BOP, BOR, BOS1, OFC1, EYA transcriptional coactivator and phosphatase 1
External IDs	OMIM: 601653 MGI: 109344 HomoloGene: 74943 GeneCards: EYA1
Gene location (Human)
Chr.	Chromosome 8 (human)[1]
End	71,592,025 bp[1]
Gene location (Mouse)
Chr.	Chromosome 1 (mouse)[2]
End	14,310,235 bp[2]
RNA expression pattern
	More reference expression data
Gene ontology
Molecular function	• phosphoprotein phosphatase activity; • metal ion binding; • GO:0001948 protein binding; • RNA binding; • protein tyrosine phosphatase activity; • hydrolase activity;
Cellular component	• cytoplasm; • protein-DNA complex; • cell nucleus; • nucleoplasm; • nuclear body; • macromolecular complex;
Biological process	• pattern specification process; • response to ionizing radiation; • regulation of neuron differentiation; • embryonic skeletal system morphogenesis; • ureteric bud development; • cell fate commitment; • striated muscle tissue development; • semicircular canal morphogenesis; • regulation of transcription, DNA-templated; • anatomical structure development; • positive regulation of epithelial cell proliferation; • neuron fate specification; • anatomical structure morphogenesis; • positive regulation of DNA repair; • protein dephosphorylation; • outflow tract morphogenesis; • otic vesicle morphogenesis; • outer ear morphogenesis; • sensory perception of sound; • aorta morphogenesis; • protein sumoylation; • transcription, DNA-templated; • otic vesicle development; • cellular response to DNA damage stimulus; • histone dephosphorylation; • multicellular organism development; • ear morphogenesis; • positive regulation of transcription, DNA-templated; • branching involved in ureteric bud morphogenesis; • cochlea morphogenesis; • inner ear morphogenesis; • middle ear morphogenesis; • animal organ morphogenesis; • positive regulation of secondary heart field cardioblast proliferation; • peptidyl-tyrosine dephosphorylation; • metanephros development; • mesodermal cell fate specification; • positive regulation of transcription from RNA polymerase II promoter; • pharyngeal system development; • negative regulation of extrinsic apoptotic signaling pathway in absence of ligand; • double-strand break repair; • DNA repair; • cell differentiation; • chromatin organization;
	Sources:Amigo / QuickGO
Orthologs
	2138
	14048
	ENSG00000104313
	ENSMUSG00000025932
	Q99502
	P97767
NM_000503; NM_001288574; NM_001288575; NM_172058; NM_172059;
	NM_172060; NM_001370333; NM_001370334; NM_001370335; NM_001370336
	NM_001252192; NM_010164; NM_001310459
NP_000494; NP_001275503; NP_001275504; NP_742055; NP_742056;
	NP_001357262; NP_001357263; NP_001357264; NP_001357265
	NP_001239121; NP_001297388; NP_034294
	Wikidata
View/Edit Human	View/Edit Mouse

Eyes absent homolog 1 is a protein that in humans is encoded by the EYA1 gene.[5][6]

This gene encodes a member of the eyes absent (EYA) family of proteins. The encoded protein may play a role in the developing kidney, branchial arches, eye, and ear. Mutations of this gene have been associated with branchiootorenal dysplasia syndrome, branchiootic syndrome, and sporadic cases of congenital cataracts and ocular anterior segment anomalies. A similar protein in mice can act as a transcriptional activator. Four transcript variants encoding three distinct isoforms have been identified for this gene.[6]

Interactions

EYA1 has been shown to interact with SIX1.[7]

gollark: GNU/Monads also have to be applicatives and functors.

gollark: I'd just like to interject for a moment. What you’re referring to as Monad, is in fact, GNU/Monad, or as I’ve recently taken to calling it, GNU plus Monad. Monad is not an operating system unto itself, but rather another free component of a fully functioning GNU system made useful by the GNU corelibs, shell utilities and vital system components comprising a full OS as defined by POSIX. Many computer users run a modified version of the GNU system every day, without realizing it. Through a peculiar turn of events, the version of GNU which is widely used today is often called “Monad”, and many of its users are not aware that it is basically the GNU system, developed by the GNU Project. There really is a Monad, and these people are using it, but it is just a part of the system they use. Monad is the kernel: the program in the system that allocates the machine’s resources to the other programs that you run. The kernel is an essential part of an operating system, but useless by itself; it can only function in the context of a complete operating system. Monad is normally used in combination with the GNU operating system: the whole system is basically GNU with Monad added, or GNU/Monad. All the so-called “Monad” distributions are really distributions of GNU/Monad.

gollark: ++search !wen pi calculus

gollark: Oh, not that... it should run over discord channels though.

gollark: Channel based... Discord channels?

References

GRCh38: Ensembl release 89: ENSG00000104313 - Ensembl, May 2017
GRCm38: Ensembl release 89: ENSMUSG00000025932 - Ensembl, May 2017
"Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
"Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
Abdelhak S, Kalatzis V, Heilig R, Compain S, Samson D, Vincent C, Weil D, Cruaud C, Sahly I, Leibovici M, Bitner-Glindzicz M, Francis M, Lacombe D, Vigneron J, Charachon R, Boven K, Bedbeder P, Van Regemorter N, Weissenbach J, Petit C (Mar 1997). "A human homologue of the Drosophila eyes absent gene underlies branchio-oto-renal (BOR) syndrome and identifies a novel gene family". Nat Genet. 15 (2): 157–64. doi:10.1038/ng0297-157. PMID 9020840.
"Entrez Gene: EYA1 eyes absent homolog 1 (Drosophila)".
Buller, C; Xu X; Marquis V; Schwanke R; Xu P X (Nov 2001). "Molecular effects of Eya1 domain mutations causing organ defects in BOR syndrome". Hum. Mol. Genet. England. 10 (24): 2775–81. doi:10.1093/hmg/10.24.2775. ISSN 0964-6906. PMID 11734542.

Stoppa-Lyonnet D, Carter PE, Meo T, Tosi M (1990). "Clusters of intragenic Alu repeats predispose the human C1 inhibitor locus to deleterious rearrangements". Proc. Natl. Acad. Sci. U.S.A. 87 (4): 1551–5. Bibcode:1990PNAS...87.1551S. doi:10.1073/pnas.87.4.1551. PMC 53513. PMID 2154751.
Vincent C, Kalatzis V, Abdelhak S, et al. (1998). "BOR and BO syndromes are allelic defects of EYA1". Eur. J. Hum. Genet. 5 (4): 242–6. PMID 9359046.
Abdelhak S, Kalatzis V, Heilig R, et al. (1998). "Clustering of mutations responsible for branchio-oto-renal (BOR) syndrome in the eyes absent homologous region (eyaHR) of EYA1". Hum. Mol. Genet. 6 (13): 2247–55. doi:10.1093/hmg/6.13.2247. PMID 9361030.
Pignoni F, Hu B, Zavitz KH, et al. (1998). "The eye-specification proteins So and Eya form a complex and regulate multiple steps in Drosophila eye development". Cell. 91 (7): 881–91. doi:10.1016/S0092-8674(00)80480-8. PMID 9428512.
Kumar S, Kimberling WJ, Weston MD, et al. (1998). "Identification of three novel mutations in human EYA1 protein associated with branchio-oto-renal syndrome". Hum. Mutat. 11 (6): 443–9. doi:10.1002/(SICI)1098-1004(1998)11:6<443::AID-HUMU4>3.0.CO;2-S. PMID 9603436.
Kalatzis V, Sahly I, El-Amraoui A, Petit C (1999). "Eya1 expression in the developing ear and kidney: towards the understanding of the pathogenesis of Branchio-Oto-Renal (BOR) syndrome". Dev. Dyn. 213 (4): 486–99. doi:10.1002/(SICI)1097-0177(199812)213:4<486::AID-AJA13>3.0.CO;2-L. PMID 9853969.
Kumar S, Deffenbacher K, Cremers CW, et al. (1999). "Branchio-oto-renal syndrome: identification of novel mutations, molecular characterization, mutation distribution, and prospects for genetic testing". Genet. Test. 1 (4): 243–51. doi:10.1089/gte.1997.1.243. PMID 10464653.
Ohto H, Kamada S, Tago K, et al. (1999). "Cooperation of six and eya in activation of their target genes through nuclear translocation of Eya". Mol. Cell. Biol. 19 (10): 6815–24. doi:10.1128/mcb.19.10.6815. PMC 84678. PMID 10490620.
Azuma N, Hirakiyama A, Inoue T, et al. (2000). "Mutations of a human homologue of the Drosophila eyes absent gene (EYA1) detected in patients with congenital cataracts and ocular anterior segment anomalies". Hum. Mol. Genet. 9 (3): 363–6. doi:10.1093/hmg/9.3.363. PMID 10655545.
Rickard S, Boxer M, Trompeter R, Bitner-Glindzicz M (2000). "Importance of clinical evaluation and molecular testing in the branchio-oto-renal (BOR) syndrome and overlapping phenotypes". J. Med. Genet. 37 (8): 623–7. doi:10.1136/jmg.37.8.623. PMC 1734672. PMID 10991693.
Rickard S, Parker M, van't Hoff W, et al. (2001). "Oto-facio-cervical (OFC) syndrome is a contiguous gene deletion syndrome involving EYA1: molecular analysis confirms allelism with BOR syndrome and further narrows the Duane syndrome critical region to 1 cM". Hum. Genet. 108 (5): 398–403. doi:10.1007/s004390100495. PMID 11409867.
Namba A, Abe S, Shinkawa H, et al. (2001). "Genetic features of hearing loss associated with ear anomalies: PDS and EYA1 mutation analysis". J. Hum. Genet. 46 (9): 518–21. doi:10.1007/s100380170033. PMID 11558900.
Fukuda S, Kuroda T, Chida E, et al. (2002). "A family affected by branchio-oto syndrome with EYA1 mutations". Auris Nasus Larynx. 28 Suppl: S7–11. doi:10.1016/s0385-8146(01)00082-7. PMID 11683347.
Buller C, Xu X, Marquis V, et al. (2002). "Molecular effects of Eya1 domain mutations causing organ defects in BOR syndrome". Hum. Mol. Genet. 10 (24): 2775–81. doi:10.1093/hmg/10.24.2775. PMID 11734542.
Ozaki H, Watanabe Y, Ikeda K, Kawakami K (2002). "Impaired interactions between mouse Eyal harboring mutations found in patients with branchio-oto-renal syndrome and Six, Dach, and G proteins". J. Hum. Genet. 47 (3): 107–16. doi:10.1007/s100380200011. PMID 11950062.
Xu PX, Zheng W, Laclef C, et al. (2002). "Eya1 is required for the morphogenesis of mammalian thymus, parathyroid and thyroid". Development. 129 (13): 3033–44. PMID 12070080.
Vervoort VS, Smith RJ, O'Brien J, et al. (2003). "Genomic rearrangements of EYA1 account for a large fraction of families with BOR syndrome". Eur. J. Hum. Genet. 10 (11): 757–66. doi:10.1038/sj.ejhg.5200877. PMID 12404110.
Fougerousse F, Durand M, Lopez S, et al. (2003). "Six and Eya expression during human somitogenesis and MyoD gene family activation". J. Muscle Res. Cell. Motil. 23 (3): 255–64. doi:10.1023/A:1020990825644. PMID 12500905.
Yashima T, Noguchi Y, Ishikawa K, et al. (2003). "Mutation of the EYA1 gene in patients with branchio-oto syndrome". Acta Otolaryngol. 123 (2): 279–82. doi:10.1080/0036554021000028103. PMID 12701758.

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[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000104313 - Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000025932 - Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid9020840-5] Abdelhak S, Kalatzis V, Heilig R, Compain S, Samson D, Vincent C, Weil D, Cruaud C, Sahly I, Leibovici M, Bitner-Glindzicz M, Francis M, Lacombe D, Vigneron J, Charachon R, Boven K, Bedbeder P, Van Regemorter N, Weissenbach J, Petit C (Mar 1997). "A human homologue of the Drosophila eyes absent gene underlies branchio-oto-renal (BOR) syndrome and identifies a novel gene family". Nat Genet. 15 (2): 157–64. doi:10.1038/ng0297-157. PMID 9020840.

[entrez-6] "Entrez Gene: EYA1 eyes absent homolog 1 (Drosophila)".

[pmid11734542-7] Buller, C; Xu X; Marquis V; Schwanke R; Xu P X (Nov 2001). "Molecular effects of Eya1 domain mutations causing organ defects in BOR syndrome". Hum. Mol. Genet. England. 10 (24): 2775–81. doi:10.1093/hmg/10.24.2775. ISSN 0964-6906. PMID 11734542.

EYA1

Interactions

References

Further reading