Phanerochaete

Phanerochaete is a genus of crust fungi in the family Phanerochaetaceae.

Phanerochaete
Phanerochaete velutina
Scientific classification
Kingdom: Fungi
Division: Basidiomycota
Class: Agaricomycetes
Order: Polyporales
Family: Phanerochaetaceae
Genus: Phanerochaete
P.Karst (1889)
Type species
Phanerochaete alnea
(Fr.) P.Karst. (1889)
Synonyms[1]
  • Corticium Fr. (1835)
  • Xerocarpus P.Karst. (1881)
  • Grandiniella P.Karst. (1895)
  • Membranicium J.Erikss. (1958)

Taxonomy

The genus was circumscribed by Finnish mycologist Petter Karsten in 1889.[2] Marinus Anton Donk redefined the limits of the genus in two publications in 1957 and 1962.[3][4] Phanerochaete has traditionally been delimited based on the overall morphology of the fruit body, as well as microscopic characteristics including the nature of the hyphal structure, cystidia, and spores. Molecular analyses demonstrate that the genus is polyphyletic, containing members placed throughout the phlebioid clade of the Polyporales.[5][6]

The genus name is derived from the Greek words φανεφός ("distinct") and χαίτη ("hair").[3]

Description

Phanerochaete species have membranaceous, crust-like fruit bodies. The hyphal system is monomitic, with simple-septate generative hyphae; single or multiple clamps may be present in the subiculum. The basidia (spore-bearing cells) are club-shaped and smooth. Spores of the genus are thin-walled, inamyloid, hyaline, and have a cylindrical to ellipsoidal shape. Phanerochaete species cause white rot on both conifers and hardwoods.[5]

Chemistry

Phanerochaete includes white rot fungi that are able to degrade the woody polymer lignin to carbon dioxide. This is achieved, in part, by lignin peroxidases and manganese peroxidases. These peroxidases are also able to mediate oxidation of a wide variety of organic pollutants. The genome of Phanerochaete chrysosporium was sequenced and shows the genetic potential to make over 100 cytochrome P450 monooxygenases.[7] White rot fungi have been used in bioremediation efforts to break down potentially harmful chemicals in soil and in water.[8] For example, phenol-formaldehyde is degraded by P. chrysosporium,[9] while P. sordida breaks down the neonicotinoid pesticide clothianidin.[10]

Species

As of December 2016, Index Fungorum accepts 92 species of Phanerochaete:[11]

  • Phanerochaete aculeata Hallenb. (1978)
  • Phanerochaete affinis (Burt) Parmasto (1968)
  • Phanerochaete alba Sang H.Lin & Z.C.Chen (1990)[12] – Taiwan
  • Phanerochaete albida Sheng H.Wu (1990)
  • Phanerochaete allantospora Burds. & Gilb. (1974)[13]
  • Phanerochaete alnea (Fr.) P.Karst. (1889)
  • Phanerochaete aluticolor (Bres. & Torrend) Melo, J.Cardoso, M.Dueñas, Salcedo & Tellería (2012)
  • Phanerochaete andreae Burds., Beltrán-Tej. & Rodr.-Armas (1995)[14]
  • Phanerochaete angustocystidiata Sheng H.Wu (2000)[15] – Taiwan
  • Phanerochaete arenata (P.H.B.Talbot) Jülich (1979)
  • Phanerochaete areolata (G.Cunn.) Hjortstam & Ryvarden (1990)
  • Phanerochaete argillacea Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete arizonica Burds. & Gilb. (1974)[13]
  • Phanerochaete aurantiobadia Ghobad-Nejhad, S.L.Liu & E.Langer (2015)[17]
  • Phanerochaete australis Jülich (1980)
  • Phanerochaete avellanea (Bres.) J.Erikss. & Hjortstam (1981)
  • Phanerochaete bambucicola Sheng H.Wu (2018)[18]
  • Phanerochaete binucleospordida Boidin, Lanq. & Gilles (1993)
  • Phanerochaete brunnea Sheng H.Wu (1990)
  • Phanerochaete bubalina Burds. (1985)
  • Phanerochaete burtii (Romell ex Burt) Parmasto (1967)
  • Phanerochaete cacaina (Bourdot & Galzin) Burds. & Gilb. (1974)[13]
  • Phanerochaete cana (Burt) Burds. (1985)
  • Phanerochaete capitata Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete carnosa (Burt) Parmasto (1967)
  • Phanerochaete caucasica (Parmasto) Burds. (1985)
  • Phanerochaete citri A.B.De (1991)[19] – India
  • Phanerochaete citrinosanguinea D.Floudas & Hibbett (2015)[6]
  • Phanerochaete commixtoides Sang H.Lin & Z.C.Chen (1990)
  • Phanerochaete conifericola D.Floudas & D.S.Hibbett (2015)[6]
  • Phanerochaete cordylines (G.Cunn.) Burds. (1985)
  • Phanerochaete cremeo-ochracea (Bourdot & Galzin) Hjortstam (1987)
  • Phanerochaete crescentispora Gilb. & Hemmes (2001)
  • Phanerochaete cryptocystidiata Nakasone (2008)
  • Phanerochaete deflectens (P.Karst.) Hjortstam (1987)
  • Phanerochaete eburnea Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete eichleriana Bres. (1903)[20]
  • Phanerochaete emplastra (Berk. & Broome) Hjortstam (1989)
  • Phanerochaete exigua (Burt) Nakasone, Burds. & Lodge (1998)
  • Phanerochaete exilis (Burt) Burds. (1985)
  • Phanerochaete flava (Burt) Nakasone, Burds. & Lodge (1998)
  • Phanerochaete flavidogrisea Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete flavocarnea (Petch) Hjortstam (1995)
  • Phanerochaete fulva Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete furfuraceovelutinus (Rick) Rajchenb. (1987)
  • Phanerochaete globosa Sang H.Lin & Z.C.Chen (1990)[12] – Taiwan
  • Phanerochaete granulata Sheng H.Wu (2007)
  • Phanerochaete hiulca (Burt) A.L.Welden (1980)
  • Phanerochaete hyphocystidiata Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete incarnata Sheng H.Wu (2017)[18] – Taiwan
  • Phanerochaete incrustans (Speg.) Rajchenb. & J.E.Wright (1987)
  • Phanerochaete infuscata Hjortstam & Ryvarden (2004)[21]
  • Phanerochaete intertexta Sheng H.Wu (1990)
  • Phanerochaete investiens (Berk.) P.Roberts (2009)
  • Phanerochaete jose-ferreirae (D.A.Reid) D.A.Reid (1975)
  • Phanerochaete laevis (Fr.) J.Erikss. & Ryvarden (1978)
  • Phanerochaete leptoderma Sheng H.Wu (1990)
  • Phanerochaete lutea (Sheng H.Wu) Hjortstam (1995)
  • Phanerochaete luteoaurantiaca (Wakef.) Burds. (1985)
  • Phanerochaete macrocystidiata Hallenb. (1978)
  • Phanerochaete martelliana (Bres.) J.Erikss. & Ryvarden (1978)
  • Phanerochaete mauiensis Gilb. & Adask. (1993)
  • Phanerochaete odontoidea Sheng H.Wu (2000)[15] – Taiwan
  • Phanerochaete oreophila Gilb. & Hemmes (2004)
  • Phanerochaete pallida Parmasto (1967)
  • Phanerochaete parmastoi Sheng H.Wu (1990)
  • Phanerochaete parvispora Sheng H.Wu & Losi (1995)[22] – Europe
  • Phanerochaete percitrina P.Roberts & Hjortstam (2000)[23] – Africa
  • Phanerochaete phosphorescens (Burt) A.L.Welden (1980)
  • Phanerochaete porostereoides S.L.Liu & S.H.He (2016)[24] – China
  • Phanerochaete pseudosanguinea D.Floudas & D.S.Hibbett (2015)[6]
  • Phanerochaete queletii (Bres.) Nakasone (2008)
  • Phanerochaete radulans Hallenb. (1978)[25]
  • Phanerochaete reflexa Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete rhodella (Peck) D.Floudas & D.S.Hibbett (2015)[6]
  • Phanerochaete robusta Parmasto (1968)
  • Phanerochaete rubescens Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete sacchari (Burt) Burds. (1985)
  • Phanerochaete salmoneolutea Burds. & Gilb. (1974)[13]
  • Phanerochaete sanguineocarnosa D.Floudas & Hibbett (2015)[6]
  • Phanerochaete sanwicensis Gilb. & Hemmes (2004)
  • Phanerochaete sordida (P.Karst.) J.Erikss. & Ryvarden (1978)
P. sordida
  • Phanerochaete stereoides Sheng H.Wu (1995)
  • Phanerochaete suballantoidea Sheng H.Wu (1998)[16] – Taiwan
  • Phanerochaete subceracea (Burt) Burds. (1985)
  • Phanerochaete subcrassispora P.Roberts & Hjortstam (2009)
  • Phanerochaete subglobosa Sheng H.Wu (1990)
  • Phanerochaete subiculosa (Burt) Burds. (1985)
  • Phanerochaete taiwaniana Sheng H.Wu (1990)
  • Phanerochaete tamariciphila Boidin, Lanq. & Gilles (1993)
  • Phanerochaete thailandica Kout & Sádlíková (2017)[26] – Thailand
  • Phanerochaete tropica (Sheng H.Wu) Hjortstam (1995)
  • Phanerochaete tuberculascens Hjortstam (2000)[27]
  • Phanerochaete tuberculata (P.Karst.) Parmasto (1968)
  • Phanerochaete velutina (DC.) P.Karst. (1898)
  • Phanerochaete vesiculosa S.Martínez & Nakasone (2005)[28] – Uruguay
  • Phanerochaete xerophila Burds. (1985)[29]

Further reading
  • Spirin, Viacheslav; Volobuev, Sergey; Okun, Mikhail; Miettinen, Otto; Larsson, Karl-Henrik (2016). "What is the type species of Phanerochaete (Polyporales, Basidiomycota)?". Mycological Progress. 16 (2): 171–183. doi:10.1007/s11557-016-1267-8.
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References
  1. "Phanerochaete P. Karst. 1889". MycoBank. International Mycological Association. Retrieved 2012-05-02.
  2. Karsten, Petter (1889). "Kritisk öfversigt af Finlands Basidsvampar (Basidiomycetes; Gastero- & Hymenomycetes)". Bidrag till Kännedom of Finlands Natur Folk (in Finnish). 48: 1–470 (see p. 426).
  3. Donk, M.A. (1957). "The proposed names for Hymenomycetes. VII: "Thelephoraceae" (Conclusion)". Taxon. 6 (4): 106–123. doi:10.2307/1217754.
  4. Donk, M.A. (1962). "Notes on resupinate Hymenomycetes-VI". Persoonia. 2: 217–238.
  5. Wu, Sheng-Hua; Nilsson, Henrik R.; Chen, Cheng-Tao; Yu, Shi-Yi; Hallenberg, Nils (2010). "The white-rotting genus Phanerochaete is polyphyletic and distributed throughout the phleboid clade of the Polyporales (Basidiomycota)". Fungal Diversity. 42 (1): 107–118. doi:10.1007/s13225-010-0031-7.
  6. Floudas, D; Hibbett, D.S. (2015). "Revisiting the taxonomy of Phanerochaete (Polyporales, Basidiomycota) using a four gene dataset and extensive ITS sampling". Fungal Biology. 119: 679–719. doi:10.1016/j.funbio.2015.04.003. PMID 26228559.
  7. Martinez, Diego; Larrondo, Luis F.; Putnam, Nik; Gelpke, Maarten D Sollewijn; Huang, Katherine; Chapman, Jarrod; Helfenbein, Kevin G.; Ramaiya, Preethi; Detter, J. Chris; Larimer, Frank; Coutinho, Pedro M.; Henrissat, Bernard; Berka, Randy; Cullen, Dan; Rokhsar, Daniel (2004). "Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78". Nature Biotechnology. 22 (6): 695–700. doi:10.1038/nbt967. PMID 15122302.
  8. Syed, K.; Yadav, J.S. (2012). "P450 monooxygenases (P450ome) of the model white rot fungus Phanerochaete chrysosporium". Critical Reviews in Microbiology. 38 (4): 339–363. doi:10.3109/1040841X.2012.682050. PMC 3567848. PMID 22624627.
  9. Gusse, A.C.; Miller, P.D.; Volk, T.J. (2006). "White-rot fungi demonstrate first biodegradation of phenolic resin". Environmental Science and Technology. 40: 4196–9. doi:10.1021/es060408h. PMID 16856735.
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  11. Kirk PM. "Species Fungorum (version 29th November 2016). In: Species 2000 & ITIS Catalogue of Life". Retrieved 2016-12-01.
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  14. Burdsall, H.H.; Beltrán-Tejera, E.; Rodríguez-Armas, J.L. (1995). "Phanerochaete andreae sp. nov. (Aphyllophorales, Basidiomycotina), from the Canary Islands". Mycotaxon. 54: 295–298.
  15. Wu, S.H. (2000). "Six new species of Phanerochaete from Taiwan". Botanical Bulletin of the Academia Sinica (Taipei). 41: 165–174.
  16. Wu, Sheng-Hua (1998). "Nine new species of Phanerochaete from Taiwan". Mycological Research. 102 (9): 1126–1132. doi:10.1017/S0953756298006091.
  17. Ghobad-Nejhad, Masoomeh; Liu, Shi-Liang; Dai, Yu-Cheng (2015). "Molecular and morphological evidence reveal a new non-cystidiate species belonging to the core Phanerochaete (Polyporales)". Mycological Progress. 14: 69. doi:10.1007/s11557-015-1072-9.
  18. Sheng-Hua Wu; Yu-Ping Chen; Chia-Ling Wei; Dimitrios Floudas; Yu-Cheng Dai (2018). "Two new species of Phanerochaete (Basidiomycota) and redescription of P. robusta". Mycological Progress. 17 (4): 425–435. doi:10.1007/s11557-017-1368-z.
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  21. Hjortstam, K.; Ryvarden, L. (2004). "Some new tropical genera and species of corticioid fungi (Basidiomycotina, Aphyllophorales)". Synopsis Fungorum. 18: 20–32.
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  25. Hallenberg, N. (1978). "Wood-Fungi (Corticiaceae, Coniophoraceae, Lachnocladiaceae, Thelephoraceae) in N. Iran. I". Iranian Journal of Plant Pathology. 14: 38–87.
  26. Sádlíková, M.; Kout, J. (2017). "A new Phanerochaete (Polyporales, Basidiomycota) with brown subicular hyphae from Thailand" (PDF). Mycosphere. 8 (1): 1124–1030.
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