Acidimicrobiia

The Acidimicrobiia are a class of Actinobacteria, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.[1]

Acidimicrobiia
Acidimicrobium ferrooxidans
Scientific classification
Domain:	Bacteria
Phylum:	Actinobacteria
Class:	Acidimicrobiia Norris 2013
Order
Acidimicrobiales
Synonyms
Acidimicrobiidae Stackebrandt, Rainey & Ward-Rainey 1997 emend. Zhi, Li & Stackebrandt 2009

Phylogeny

The phylogeny is based on 16S rRNA-based LTP release 123 by 'The All-Species Living Tree' Project.[2]

Acidimicrobiaceae   Aciditerrimonas ferrireducens Itoh et al. 2011       Ferrithrix thermotolerans Johnson et al. 2009       Acidimicrobium ferrooxidans Clark and Norris 1996     Ferrimicrobium acidiphilum Johnson et al. 2009           Iamiaceae   Iamia majanohamensis Kurahashi et al. 2009     Aquihabitans daechungensis Jin et al. 2013     Ilumatobacter   I. fluminis Matsumoto et al. 2009       I. coccineus corrig. Matsumoto et al. 2013     I. nonamiensis corrig. Matsumoto et al. 2013

Taxonomy

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[4]

• Class Acidimicrobiia Norris 2013 [Acidimicrobiidae Stackebrandt, Rainey & Ward-Rainey 1997 emend. Zhi, Li & Stackebrandt 2009]
  • Order Acidimicrobiales Stackebrandt, Rainey & Ward-Rainey 1997 emend. Zhi, Li & Stackebrandt 2009 ["Acidimicrobineae" Garrity, Bell & Lilburn 2003]
    • Family "Candidatus Microthrixaceae" Joseph et al. 2003
      • Genus Candidatus Microthrix" Blackall et al. 1996
        • Species "Ca. M. calida" ♠ Levantesi et al. 2006
        • Species "Ca. M. parvicella" ♠ Blackall et al. 1996
    • Family Iamiaceae Kurahashi et al. 2009
      • Genus Aquihabitans Jin et al. 2013
        • Species Aquihabitans daechungensis Jin et al. 2013
      • Genus Iamia Kurahashi et al. 2009
        • Species Iamia majanohamensis Kurahashi et al. 2009
    • Family Acidimicrobiaceae Stackebrandt et al. 1997 emend. Zhi et al. 2009
      • Genus Aciditerrimonas Itoh et al. 2011
        • Species Aciditerrimonas ferrireducens Itoh et al. 2011
      • Genus Acidimicrobium Clark and Norris 1996
        • Species Acidimicrobium ferrooxidans Clark & Norris 1996
      • Genus "Acidithiomicrobium" ♠ Davis-Belmar & Norris 2009
      • Genus "Acidithrix" ♠ Kay et al. 2013
        • Species "Acidithrix ferrooxidans" ♠ Kay et al. 2013
      • Genus Ferrimicrobium Johnson et al. 2009
        • Species Ferrimicrobium acidiphilum Johnson et al. 2009
      • Genus Ferrithrix Johnson et al. 2009
        • Species Ferrithrix thermotolerans Johnson et al. 2009
      • Genus Ilumatobacter Matsumoto et al. 2009
        • Species I. fluminis Matsumoto et al. 2009
        • Species I. coccineus corrig. Matsumoto et al. 2013
        • Species I. nonamiensis corrig. Matsumoto et al. 2013

Notes:
♠ Strains found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LSPN)

See also

List of bacterial orders

References

1. Stackebrandt E, Rainey FA, Ward-Rainey NL (1997). "Proposal for a new hierarchic classification system, Actinobacteria classis nov". International Journal of Systematic Bacteriology. 47 (2): 479–491. doi:10.1099/00207713-47-2-479. Archived from the original on 2011-05-15. Retrieved 2016-10-11.
2. 'The All-Species Living Tree' Project."16S rRNA-based LTP release 123 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2016-03-20.
3. J.P. Euzéby. "Acidimicrobiia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2016-03-20.
4. Sayers; et al. "Acidimicrobiia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.