Barcode of Life Data System

The Barcode of Life Data System (commonly known as BOLD or BOLDSystems) is a sequence database specifically devoted to DNA barcoding. It also provides an online platform for analyzing DNA sequences.[1] As of 2017, BOLD included over 5.9 million DNA barcode sequences from over 542,000 species.[2]

References

Ratnasingham, Sujeevan; Paul D. N. Hebert (2007). "BOLD: The Barcode of Life Data System (http://www.barcodinglife.org)". Molecular Ecology Notes. 7 (3): 355–364. doi:10.1111/j.1471-8286.2007.01678.x. PMC 1890991. PMID 18784790.
Stoeckle, Mark (November–December 2013). "DNA Barcoding Ready for Breakout". GeneWatch. 26 (5).

External links

Wikidata has the property:

BOLD Systems taxon ID (P3606) (see uses)

Official website

Bioinformatics
Databases	Sequence databases: GenBank, European Nucleotide Archive and DNA Data Bank of Japan Secondary databases: UniProt, database of protein sequences grouping together Swiss-Prot, TrEMBL and Protein Information Resource Other databases: Protein Data Bank, Ensembl and InterPro Specialised genomic databases: BOLD, Saccharomyces Genome Database, FlyBase, VectorBase, WormBase, PHI-base, Arabidopsis Information Resource and Zebrafish Information Network
Software	BLAST Bowtie Clustal EMBOSS HMMER MUSCLE SAMtools TopHat
Other	Server: ExPASy Ontology: Gene Ontology Rosalind (education platform)
Institutions	Broad Institute Computational Biology Department (CBD) Microsoft Research - University of Trento Centre for Computational and Systems Biology (COSBI) Database Center for Life Science (DBCLS) DNA Data Bank of Japan (DDBJ) European Bioinformatics Institute (EMBL-EBI) European Molecular Biology Laboratory (EMBL) Flatiron Institute J. Craig Venter Institute (JCVI) Max Planck Institute of Molecular Cell Biology and Genetics (MPI-CBG) US National Center for Biotechnology Information (NCBI) Japanese Institute of Genetics Netherlands Bioinformatics Centre (NBIC) Philippine Genome Center (PGC) Scripps Research Swiss Institute of Bioinformatics (SIB) Wellcome Sanger Institute Whitehead Institute
Organizations	African Society for Bioinformatics and Computational Biology (ASBCB) Australia Bioinformatics Resource (EMBL-AR) European Molecular Biology network (EMBnet) International Nucleotide Sequence Database Collaboration (INSDC) International Society for Biocuration (ISB) International Society for Computational Biology (ISCB) Student Council (ISCB-SC) Institute of Genomics and Integrative Biology (CSIR-IGIB) Japanese Society for Bioinformatics (JSBi)
Meetings	Basel Computational Biology Conference‎ ([BC²]) European Conference on Computational Biology (ECCB) Intelligent Systems for Molecular Biology (ISMB) International Conference on Bioinformatics (InCoB) ISCB Africa ASBCB Conference on Bioinformatics Pacific Symposium on Biocomputing (PSB) Research in Computational Molecular Biology (RECOMB)
File formats	CRAM format FASTA format FASTQ format NeXML format Nexus format Pileup format SAM format Stockholm format
Related topics	Computational biology List of biological databases Molecular phylogenetics Sequencing Sequence database Sequence alignment
Category Commons

Taxonbar databases

ABA • ADW • AFD • AfroMoths • AlgaeBase • AmphibiaWeb • AntWeb • AoI • AoFP • APA • APDB • APNI • APSA • Araneae • ARKive • ASW • ATRF • Avibase • BacDive • BAMONA • BHL • BioLib • BirdLife • BirdLife-Australia • BOLD • BTO • BugGuide • ButMoth • Calflora • Cal-IPC • Center • CMS • CNPS • Cockroach Species File • Conifers.org • Coreoidea Species File • eBird • Ecocrop • ECOS • eFloraSA • EoL • EPPO • EUNIS • Euring • Fauna Europaea • Fauna Europaea (new) • FEIS • FishBase • FloraBase • FLOW • FNA • FoAO • FoAO2 • FoC • FoIO • Fossilworks • Fungorum • GBIF • GISD • GNAB • GONIAT • GrassBase • GRIN • IBC • iNaturalist • IPA • IPNI • IRMNG • ISC • ITIS • IUCN • LepIndex • LoB • LPSN • Mantodea Species File • MichiganFlora • MoBotPF • MoL • MNHN • MONA • MSW • MycoBank • NAS • NBN • NCBI • Neotropical • NOAA • NSWFlora • NTFlora • NZBO • NZOR • NZPCN • ODNR • Orthoptera Species File • PalDat • Panartic Flora • PfaF • PFI • Phasmida Species File • PPE • Plant List • PLANTS • Plazi • POWO • RD • SANBI • SCC • SeaLifeBase • SEINet • Species+ • SPRAT • Steere • Tree of Life • Tropicos • TSA • uBio • VASCAN • VicFlora • Watson & Dallwitz • WCSP • WiO • WisFlora • WoI • WFO • WoRMS • WSC • Xeno-canto • ZooBank • eMonocot • World Spider Catalog

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