The Microsoft DNS server won't forward requests for domains it's authoritative for. I suspect that you've specified a "secondary" DNS server on your client computers that refers to another DNS server (like, say, OpenDNS) and you're periodically getting resolution from this secondary DNS server.
If you're in an Active Directory environment no domain-joined computer should have any DNS server specified in its NIC properties (either hard-set or delivered via DHCP) that refers to a DNS server that isn't running on one of your domain controllers. Your DNS servers running on your DCs should be resolving external-to-the-forest names either via forwarders to another DNS server, or via root hints.
Edit:
It sounds like you're saying that you have a DNS server specified on the clients that's not a domain controller (i.e. "my gateway").
It's unclear what you mean by "is a slave for DC". Assuming the IP address of the IP address of the DC is "X.X.X.X", the IP address of the "gateway" specified as a secondary DNS server is "Y.Y.Y.Y", and one of the internal domain names that isn't resolving properly is "foo.com", run the following commands and compare the output:
nslookup foo.com X.X.X.X
nslookup foo.com Y.Y.Y.Y
The output should match. If it doesn't, then the "gateway" is resolving the internal domain name differently than the domain controller and that's your problem.
As long as the "gateway" resolves names exactly like a domain controller it's not a problem to use it as a secondary DNS server. If it doesn't resolve names exactly the same way, though, you shouldn't be using it as a secondary DNS server. Every time you add an AD-integrated DNS zone to your DC you'll need to configure the "gateway" to resolve names in that zone the same way.