The configuration files have changed since the time of the original answer.
These files no longer need to be changed:
/etc/apache2/mods-available/suphp.conf
/etc/suphp/suphp.conf
This file:
/etc/apache2/mods-available/php5.conf
only needs the <Directory /usr/share>
wrapper around the current file.
e.g.:
<Directory /usr/share>
{original php5.conf contents}
</Directory>
== Current copies of the Files for ==
NAME="Ubuntu"
VERSION="14.04.5 LTS, Trusty Tahr"
Linux anon 4.2.0-27-generic #32~14.04.1-Ubuntu SMP Fri Jan 22 15:32:26 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux
root@local [~]# cat /etc/apache2/mods-available/suphp.conf
<IfModule mod_suphp.c>
<FilesMatch "\.ph(p3?|tml)$">
SetHandler application/x-httpd-suphp
</FilesMatch>
suPHP_AddHandler application/x-httpd-suphp
<Directory />
suPHP_Engine on
</Directory>
# By default, disable suPHP for debian packaged web applications as files
# are owned by root and cannot be executed by suPHP because of min_uid.
<Directory /usr/share>
suPHP_Engine off
</Directory>
# # Use a specific php config file (a dir which contains a php.ini file)
# suPHP_ConfigPath /etc/php5/cgi/suphp/
suPHP_ConfigPath /etc/php5/apache2
# # Tells mod_suphp NOT to handle requests with the type <mime-type>.
# suPHP_RemoveHandler <mime-type>
</IfModule>
root@local [~]# cat /etc/suphp/suphp.conf
[global]
;Path to logfile
logfile=/var/log/suphp/suphp.log
;Loglevel
loglevel=info
;User Apache is running as
webserver_user=www-data
;Path all scripts have to be in
docroot=/var/www:${HOME}/public_html
;Path to chroot() to before executing script
;chroot=/mychroot
; Security options
allow_file_group_writeable=false
allow_file_others_writeable=false
allow_directory_group_writeable=false
allow_directory_others_writeable=false
;Check wheter script is within DOCUMENT_ROOT
check_vhost_docroot=true
;Send minor error messages to browser
errors_to_browser=false
;PATH environment variable
env_path="/bin:/usr/bin"
;Umask to set, specify in octal notation
umask=0077
; Minimum UID
min_uid=100
; Minimum GID
min_gid=100
[handlers]
;Handler for php-scripts
application/x-httpd-suphp="php:/usr/bin/php-cgi"
;Handler for CGI-scripts
x-suphp-cgi="execute:!self"
root@local [~]# cat /etc/apache2/mods-available/php5.conf
<FilesMatch ".+\.ph(p[345]?|t|tml)$">
SetHandler application/x-httpd-php
</FilesMatch>
<FilesMatch ".+\.phps$">
SetHandler application/x-httpd-php-source
# Deny access to raw php sources by default
# To re-enable it's recommended to enable access to the files
# only in specific virtual host or directory
Order Deny,Allow
Deny from all
</FilesMatch>
# Deny access to files without filename (e.g. '.php')
<FilesMatch "^\.ph(p[345]?|t|tml|ps)$">
Order Deny,Allow
Deny from all
</FilesMatch>
# Running PHP scripts in user directories is disabled by default
#
# To re-enable PHP in user directories comment the following lines
# (from <IfModule ...> to </IfModule>.) Do NOT set it to On as it
# prevents .htaccess files from disabling it.
<IfModule mod_userdir.c>
<Directory /home/*/public_html>
php_admin_flag engine Off
</Directory>
</IfModule>