EsyN

esyN (Easy Networks)[1][2] is a bioinformatics web-tool for visualizing, building and analysing molecular interaction networks. esyN is based on cytoscape.js and its aim is to make it easy for everybody to perform network analysis. esyN is connected with a number of databases - specifically: pombase, flybase, and most InterMine data warehouses, DrugBank, and BioGRID from which its possible to download the protein protein or genetic interactions for any protein or gene in a number of different organisms.

EsyN
Original author(s)Cambridge Systems Biology Centre
Initial releaseSeptember 2014
Stable release
2.1 / 17 January 2016 (2016-01-17)
Written inJavaScript
TypeBioinformatics software
Websitewww.esyn.org

Networks published in esyN can be easily published in other websites using the <iframe> methodology.[3]

Usage

As of January 2016 esyN is being viewed by 1500 unique users a day (about 16000 a month) according to Google Analytics.

The embedding capabilities of esyN are used by a number of databases to display their interaction data:

gollark: AR now?
gollark: In this case apparently Feather *only* wants them caught if they turn.
gollark: You receive a teleport link from the ND experimenter, and if the egg is about to die or has greeninated, you click Accept and then later send it back to them.
gollark: Probably not very.
gollark: There's possibly a good reason for the market thing - I did some calculations, and I think the influx of eggs not considered by any of the market-available ratios could have horribly broken it.

See also

References
  1. Bean; et al. (2014). "esyN: Network Building, Sharing and Publishing". PLoS ONE. 9 (9): e106035. doi:10.1371/journal.pone.0106035. PMC 4152123. PMID 25181461.
  2. Hoffman; et al. (2015). "An Ancient Yeast for Young Geneticists: A Primer on the Schizosaccharomyces pombe Model System". Genetics. 201 (2): 403–423. doi:10.1534/genetics.115.181503. PMC 4596657. PMID 26447128.
  3. "Tutorial: Welcome to esyN". esyN.org. 2018. Retrieved 10 February 2019.
  4. "Physical Interaction report". FlyBase. 21 December 2018. Retrieved 10 February 2019.
  5. "Allele : ttk[MI01174] D. melanogaster". FlyMine. November 2018. Retrieved 10 February 2019.
  6. "Report page". HumanMine. November 2018. Retrieved 10 February 2019.
  7. "Fission yeast GO slim". PomBase. Retrieved 10 February 2019.
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