DavidArndt

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reputation
2

Bioinformatician at The Metabolomics Innovation Centre (TMIC).

  • Contributed to apps including PHASTER, Heatmapper, CFM-ID, and METAGENassist
  • Contributed to the widely used Human Metabolome Database, the FooDB database, the Toxic Exposome Database, and others
  • 11+ years experience in bioinformatics and web app/software development
  • Diverse bioinformatics experience in metabolomics, cheminformatics, metagenomics, and structural biology
  • >20 peer-reviewed publications in bioinformatics
  • Programming languages: Ruby, R, Python, Perl, C, Bash, Java, Fortran, PHP
  • Web app development: Ruby on Rails, Shiny, CGI, JSP
  • MySQL/MariaDB database development
  • Container technologies (Docker, Singularity), virtual machines (VirtualBox, Vagrant)
  • >5 years as primary manager of IT infrastructure in a bioinformatics lab