Unfortunately I have very little Linux experience. We have an Amazon instance running Debian 7.6 and got a message from Amazon saying we were port scanning. We have hopefully stopped this by restricting outbound traffic via an Amazon security group, but as part of the investigation we ran:
sudo clamscan -r -i --bell
this showed the following possible infection:
/var/lib/tomcat7/update_temporary: Unix.Trojan.Elknot FOUND
and I can find very little about this (but some stuff about ElkKnot with an extra K - are they the same thing?)
The following warnings also appear multiple times in the output:
WARNING: Can't open file /sys/module/nfnetlink_log/uevent: Permission denied
LibClamAV Warning: fmap_readpage: pread fail: asked for 4094 bytes @ offset 2, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
LibClamAV Warning: fmap_readpage: pread fail: asked for 4077 bytes @ offset 19, got 0
So my questions are: How I can tell whether the reported infection is genuine or a false positive? Should I be worried about all the LibClamAV warnings? Are they an indication of something wrong, or of Debian not being set up correctly?