PCDHB5

Protocadherin beta-5 is a protein that in humans is encoded by the PCDHB5 gene.[4][5]

PCDHB5
Identifiers
AliasesPCDHB5, PCDH-BETA5, protocadherin beta 5
External IDsOMIM: 606331 MGI: 2136745 HomoloGene: 88834 GeneCards: PCDHB5
Gene location (Human)
Chr.Chromosome 5 (human)[1]
Band5q31.3Start141,135,206 bp[1]
End141,138,615 bp[1]
Orthologs
SpeciesHumanMouse
Entrez

26167

93881

Ensembl

ENSG00000113209

n/a

UniProt

Q9Y5E4

Q91VE5

RefSeq (mRNA)

NM_015669

NM_053135

RefSeq (protein)

NP_056484

NP_444365

Location (UCSC)Chr 5: 141.14 – 141.14 Mbn/a
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

This gene is a member of the protocadherin beta gene cluster, one of three related gene clusters tandemly linked on chromosome five. The gene clusters demonstrate an unusual genomic organization similar to that of B-cell and T-cell receptor gene clusters. The beta cluster contains 16 genes and 3 pseudogenes, each encoding 6 extracellular cadherin domains and a cytoplasmic tail that deviates from others in the cadherin superfamily. The extracellular domains interact in a homophilic manner to specify differential cell-cell connections. Unlike the alpha and gamma clusters, the transcripts from these genes are made up of only one large exon, not sharing common 3' exons as expected. These neural cadherin-like cell adhesion proteins are integral plasma membrane proteins. Their specific functions are unknown but they most likely play a critical role in the establishment and function of specific cell-cell neural connections.[5]

References

  1. GRCh38: Ensembl release 89: ENSG00000113209 - Ensembl, May 2017
  2. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. Wu Q, Maniatis T (Jul 1999). "A striking organization of a large family of human neural cadherin-like cell adhesion genes". Cell. 97 (6): 779–90. doi:10.1016/S0092-8674(00)80789-8. PMID 10380929.
  5. "Entrez Gene: PCDHB5 protocadherin beta 5".

Further reading


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