SPATA7

Spermatogenesis-associated protein 7 is a protein that in humans is encoded by the SPATA7 gene.[5]

SPATA7
Identifiers
Aliases	SPATA7, HEL-S-296, HSD-3.1, HSD3, LCA3, spermatogenesis associated 7
External IDs	OMIM: 609868 MGI: 2144877 HomoloGene: 10189 GeneCards: SPATA7
Gene location (Human) Chr. Chromosome 14 (human)[1] Band 14q31.3 Start 88,384,924 bp[1] End 88,470,350 bp[1]
Gene location (Mouse) Chr. Chromosome 12 (mouse)[2] Band 12|12 E Start 98,628,157 bp[2] End 98,669,815 bp[2]
RNA expression pattern More reference expression data
Gene ontology Molecular function • GO:0001948 protein binding Cellular component • microtubule cytoskeleton • cytoskeleton • GO:0035085 axoneme • cytoplasm • ciliary basal body • cell projection • photoreceptor connecting cilium • nucleoplasm • mitochondrion • cytosol • photoreceptor outer segment Biological process • visual perception • response to stimulus • photoreceptor cell maintenance • protein localization to photoreceptor outer segment • protein localization to photoreceptor connecting cilium Sources:Amigo / QuickGO
Orthologs
Species	Human	Mouse
Entrez	55812	104871
Ensembl	ENSG00000042317	ENSMUSG00000021007
UniProt	Q9P0W8	Q80VP2
RefSeq (mRNA)	NM_001040428 NM_018418	NM_001289572 NM_001289573 NM_001289574 NM_178914
RefSeq (protein)	NP_001035518 NP_060888	NP_001276501 NP_001276502 NP_001276503 NP_849245
Location (UCSC)	Chr 14: 88.38 – 88.47 Mb	Chr 12: 98.63 – 98.67 Mb
PubMed search	[3]	[4]
Wikidata
View/Edit Human View/Edit Mouse

References

1. GRCh38: Ensembl release 89: ENSG00000042317 - Ensembl, May 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000021007 - Ensembl, May 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. "Entrez Gene: SPATA7 spermatogenesis associated 7".

Further reading

• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
• Hartley JL, Temple GF, Brasch MA (2001). "DNA cloning using in vitro site-specific recombination". Genome Res. 10 (11): 1788–95. doi:10.1101/gr.143000. PMC 310948. PMID 11076863.
• Wiemann S, Weil B, Wellenreuther R, et al. (2001). "Toward a catalog of human genes and proteins: sequencing and analysis of 500 novel complete protein coding human cDNAs". Genome Res. 11 (3): 422–35. doi:10.1101/gr.GR1547R. PMC 311072. PMID 11230166.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Heilig R, Eckenberg R, Petit JL, et al. (2003). "The DNA sequence and analysis of human chromosome 14". Nature. 421 (6923): 601–7. doi:10.1038/nature01348. PMID 12508121.
• Zhang X, Liu H, Zhang Y, et al. (2004). "A novel gene, RSD-3/HSD-3.1, encodes a meiotic-related protein expressed in rat and human testis". J. Mol. Med. 81 (6): 380–7. doi:10.1007/s00109-003-0434-y. PMID 12736779.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Wiemann S, Arlt D, Huber W, et al. (2004). "From ORFeome to biology: a functional genomics pipeline". Genome Res. 14 (10B): 2136–44. doi:10.1101/gr.2576704. PMC 528930. PMID 15489336.
• Mehrle A, Rosenfelder H, Schupp I, et al. (2006). "The LIFEdb database in 2006". Nucleic Acids Res. 34 (Database issue): D415–8. doi:10.1093/nar/gkj139. PMC 1347501. PMID 16381901.