Ocean-V RNA motif
The Ocean-V RNA motif is a conserved RNA structure discovered using bioinformatics.[1] Only a few Ocean-V RNA sequences have been detected, all in sequences derived from DNA that was extracted from uncultivated bacteria found in ocean water. As of 2010, no Ocean-V RNA has been detected in any known, cultivated organism.[1]
| Ocean-V RNA | |
|---|---|
 Consensus secondary structure of Ocean-V RNAs | |
| Identifiers | |
| Symbol | Ocean-V |
| Rfam | RF01714 |
| Other data | |
| RNA type | sRNA |
| Domain(s) | Ocean metagenome |
| PDB structures | PDBe |
References
- Weinberg Z, Wang JX, Bogue J, et al. (March 2010). "Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea and their metagenomes". Genome Biol. 11 (3): R31. doi:10.1186/gb-2010-11-3-r31. PMC 2864571. PMID 20230605.
External links
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