Intergenic lcrF RNA thermometer

RNA thermometers regulate gene expression in response to temperature allowing pathogens like Yersinia to switch on silent genes after entering the host organism. Usually, RNA thermometers are located in the 5'UTR, but an intergenic RNA thermometer was found in Yersinia pseudotuberculosis. The LcrF RNA thermometer together with the termo-labile YmoA protein activates synthesis of the most crucial virulence activator LcrF (VirF). The RNA thermosensor sequence is 100% identical in all human pathogenic Yersinia species.[1][2]

LcrF intergenic thermometer
Predicted secondary structure and sequence conservation of LcrF intergenic thermometer
Identifiers
RfamRF02704
Other data
Domain(s)Bacteria
GO0045975,0009266
SO0005836
PDB structuresPDBe

References

  1. Böhme K, Steinmann R, Kortmann J, Seekircher S, Heroven AK, Berger E, Pisano F, Thiermann T, Wolf-Watz H, Narberhaus F, Dersch P (February 2012). "Concerted actions of a thermo-labile regulator and a unique intergenic RNA thermosensor control Yersinia virulence". PLoS Pathogens. 8 (2): e1002518. doi:10.1371/journal.ppat.1002518. PMC 3280987. PMID 22359501.
  2. Schwiesow L, Lam H, Dersch P, Auerbuch V (December 2015). "Yersinia Type III Secretion System Master Regulator LcrF". Journal of Bacteriology. 198 (4): 604–614. doi:10.1128/JB.00686-15. PMC 4751813. PMID 26644429.
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