Collinsella-1 RNA motif
The Collinsella-1 RNA motif denotes a particular conserved RNA structure discovered by bioinformatics.[1] Of the six sequences belonging to this motif that were originally identified, five are from uncultivated bacteria residing in the human gut, while only the sixth is in a cultivated species, Collinsella aerofaciens. The evidence supporting the stem-loops designated as "P1" and "P2" is ambiguous.
| Collinsella-1 RNA | |
|---|---|
 Consensus secondary structure of Collinsella-1 RNAs | |
| Identifiers | |
| Symbol | Collinsella-1 |
| Rfam | RF01700 |
| Other data | |
| RNA type | sRNA |
| PDB structures | PDBe |
See also
References
- Weinberg Z, Wang JX, Bogue J, et al. (March 2010). "Comparative genomics reveals 104 candidate structured RNAs from bacteria, archaea and their metagenomes". Genome Biol. 11 (3): R31. doi:10.1186/gb-2010-11-3-r31. PMC 2864571. PMID 20230605.
External links
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