Avian metaavulavirus 2

Avian metaavulavirus 2, formerly Avian paramyxovirus 2, is a species of virus belonging to the family Paramyxoviridae and genus Metaavulavirus. The virus is a negative strand RNA virus containing a monopartite genome. Avian metaavulavirus 2 is one of nine species belonging to the genus Metaavulavirus. The most common serotype of Avulavirinae is serotype 1, the cause of Newcastle disease (ND). Avian metaavulavirus 2 has been known to cause disease, specifically mild respiratory infections in domestic poultry, including turkeys and chickens, and has many economic effects on egg production and poultry industries.[5] The virus was first isolated from a strain in Yucaipa, California in 1956. Since then, other isolates of the virus have been isolated worldwide.

Domesticated poultry, including turkeys and chickens are the common host of Avian metaavulavirus 2. Upon infection, turkeys usually present mild respiratory symptoms and reduced egg production[6]

Avian metaavulavirus 2
Virus classification
(unranked):	Virus
Realm:	Riboviria
Kingdom:	Orthornavirae
Phylum:	Negarnaviricota
Class:	Monjiviricetes
Order:	Mononegavirales
Family:	Paramyxoviridae
Genus:	Metaavulavirus
Species:	Avian metaavulavirus 2
Synonyms
Avian avulavirus 2[1] Avian paramyxovirus 2[2] Yucaipa paramyxovirus[3] Yucaipa virus[4]

Viral classification

Avian metaavulavirus 2 is a negative sense RNA virus with a monopartite genome.[5] It belongs to Group V of the Baltimore Classification System of viruses.

Structure

All Paramyxovirus virus particles are composed of a ribonucleoprotein core and a lipoprotein bilayer.[7] Avian paramyxoviruses contain a viral envelope that encapsulates a spherical viral capsid containing the negative-sense RNA genome. The members of the Paramyxoviridae family, including Avian metaavulavirus 2, follow the 'rule of six,' having a genome length that is a multiple of six. This allows for proper packing of the genome in the nucleocapsid.[8] The structure of the envelope is characterized by the spike-like projections of two viral proteins, the fusion protein (F) and hemagglutinin-neuraminidase (Hn) protein. However, these protein projections may differ between the nine serotypes of avian paramyxoviruses.[8] The matrix protein (M) is believed to form the inner layer of the envelope and interacts with the F and Hn proteins on the outside of the viral envelope during viral entry.[8]

Genome

Avian metaavulavirus 2 has a negative-sense RNA genome that upon entry into the cell, must be transcribed into a positive-sense mRNA in order to produce viral proteins and to replicate the genome. It has been hypothesized by electron microscopy, that the genome assumes a left-handed helical structure.[7] The genome size of an isolated Yucaipa strain, isolated from chickens in Yucaipa, California in 1956,[9] is 14,904 nucleotides long and contains a leader sequence of 55 nucleotides at the 3' end and a trailer sequence of 154 nt at the 5'end.[10] However, other isolated strains of Avian metaavulavirus 2 have been isolated that contain genomes of similar, but different, lengths. Avian metaavulavirus 2 is one of the smallest in the Paramyxoviridae family.[10] The genome encodes six viral proteins that are separated from each other via intergenic regions that are between 3-23 nucleotides long.[10] The six viral genes are surrounded by regions of transcription stop and start signals that aid in transcription of the genome and production of subgenomic RNAs. The viral genomes of most paramyxovirus serotypes encode genes for a nucleocapsid protein (N), a phosphoprotein (P), a matrix protein (M), a fusion protein (F), a hemagglutinin-neuraminidase (Hn) protein and a large polymerase protein (L).[8]

Replication cycle

Attachment and entry

A common feature of all paramyxoviruses is the presence of two membrane-anchored glycoproteins, one required for virion attachment and one required for fusion.[11] It is believed that the F and Hn proteins present on the outer envelope of the virus assist in entry of the virus into the host cell. The fusion protein (F) is an integral membrane protein, sharing many features similar to other viral fusion proteins[11] and is directly involved in virus fusion. It is believed that two heptad repeat regions (HR1) and (HR2) form a six-helix bundle structure that helps to induce fusion of the viral membrane with the host cell membrane.[12] The Hn protein is made up of a stalk and a globular head that contains receptor-binding capabilities that bind to sialic acid receptors located on cells in the upper respiratory tract of the host.[11] It is hypothesized that interactions between the Hn and F proteins cause conformational changes in the respective proteins controlling the attachment and fusion of the viral capsid with the host cell membrane.[8]

Viral replication and production of viral protein

Avian paramyxoviruses fall under the genus Avulavirus, along with Newcastle disease in the family Paramyxoviridae.

Paramyxoviruses only encode one RNA polymerase and it is believed that replication takes place in the cytoplasm of the cell, with no involvement or entry into the host cell nucleus.[7] Little is understood as to how the polymerase assists in both viral replication and transcription and how these processes can be regulated.[13] The encoded polymerase consists of two proteins, a large subunit responsible for RNA synthesis and capping, and the encoded protein phosphoprotein (P) which acts as a cofactor.[13] As described, the viral genome includes intergenic regions between the viral genes with specific start and stop signals. The polymerase recognizes these cis-acting elements within the viral genome and initiates transcription.[13] Transcription first begins at the 3' end of the genome at a 40-55 nucleotide long promoter region. The polymerase produces subgenomic RNAs by transcribing each gene, releasing the produced RNA and then locating the next gene for transcription by the cis-acting elements present in the genome.[13] The signal at which the polymerase releases the transcribed RNA of a single gene is believed to contain a Poly U tract, leading to the capping of a poly(A) tail to the transcribed RNA.[13] In contrast to producing viral mRNA for viral protein synthesis, when replicating the viral genome, the polymerase does not start and stop at the indicated cis-acting elements between each gene. Instead, the polymerase elongates the RNA along the entire length of the genome. Described above is one model for the hypothesized viral replication and protein production of paramyxoviruses, however, other models exist that suggest the polymerase initiates replication and transcription at different areas in the genome.[13]

Assembly and release

A general model of paramyxoviruse structure including a spherical capsid that is enveloped and identified by two viral proteins, the hemagglutinin-neuraminidase protein (Hn) and a fusion protein (F). All paramyxoviruses assume this general capsid structure, however, they may differ in the proteins present on the envelope.

It is believed that the matrix protein (M) on the inner face of the viral envelope plays a major role in the budding of virus-like particles from the infected host cell.[14] The M protein interacts with the Hn and F proteins, helping to incorporate these proteins into viral particles for release.[8] It has been hypothesized that matrix proteins of paramyxoviruses interact with the host vacuolar protein sorting system to initiate budding of the host cell membrane. The interactions of the Hn, F and M proteins are not well understood, however, it is believed that paramyxovirus assembly and release relies on protein-protein interactions and specific targeting of proteins to areas of the host cell and membrane[14]

Interactions with host

In cell culture, many paramyxoviruses express a cytopathic effect by syncytium formation, the fusion of infected cells with neighboring cells producing a large multi-nucleated cell.[8] However, certain serotypes of avian paramyxovirus do not show syncytium formation, only cell rounding. Studies have shown that upon infection, microscopic lesions form in the trachea, lungs and, more rarely, in the gut of animal models infected with Avian metaavulavirus 2.[5] It has also been shown that model birds infected with isolates of Avian metaavulavirus 2 experience diarrhea and show enlarged pancreas.[5]

Tropism

Avian metaavulavirus 2 is believed to infect tissues of the respiratory tract and in some cases, tissues of the lungs. The viral envelope protein, Hn, binds to sialic acid residues present in cells in the upper respiratory tract. It has been found that in chickens, some may present mild respiratory symptoms or be asymptomatic.[9] It is believed that more severe symptoms including sinusitis and a decrease in egg production occurs in turkeys.[9] Other symptoms including reduced hatchability and infertility of eggs has been reported.[6]

Virus distribution

Avian metaavulavirus 2 has reservoirs in feral avian species and is known to cause respiratory disease and have economic impacts on egg production and poultry industries[15] The natural hosts of Avian metaavulavirus 2 include turkeys and passerines. However, other hosts include chickens, rails and psittacines. Avian metaavulavirus 2 has been reported in birds in Europe, Asia and North and South America. In the US, it has been shown that the virus more likely infects turkeys than chickens.[9] Isolates of Avian metaavulavirus 2 have been recovered from areas in the US, Bulgaria, Costa Rica, Africa and many other places, signifying that Avian metaavulavirus 2 occurs worldwide.[5]

Transmission and control

Transmission occurs slowly between domesticated turkey flocks in the United States and the mode of transmission is not well defined.[6] It is hypothesized that infections of Avian metaavulavirus 2 in domesticated poultry stem from interactions with infected wild birds.[6] Preventative measures can be taken to prevent spread of Avian metaavulavirus 2 in domesticated flocks. Such prevention measures include minimizing interactions between flocks and wild birds by bird proofing areas where poultry are housed and raised and good sanitation practices.[6] No human infections have been reported of Avian metaavulavirus 2[6]

References

1. Balkema-Buschmann, Anne; et al. (6 June 2018). "Re-organization of the family Paramyxoviridae". International Committee on Taxonomy of Viruses (ICTV). Retrieved 3 May 2019.
2. Rima, Bertus K.; et al. (June 2016). "Adding one (1) new species andrenamingof twelve (12) species in the genus Avulavirus" (PDF). International Committee on Taxonomy of Viruses (ICTV). Retrieved 3 May 2019. To rename the following taxon (or taxa): The species names in the genus Avulavirus. Current name Proposed name Avian paramyxovirus 2 Avian avulavirus 2
3. ICTV 3rd Report Matthews, R. E. F.(1979). Classification and nomenclature of viruses. Thirdreport of the International Committee on Taxonomy of Viruses. Intervirology 12: 129-296. p217 https://talk.ictvonline.org/ictv/proposals/ICTV%203rd%20Report.pdf
4. 1ICTV 5th Report Francki, R. I. B., Fauquet, C. M., Knudson, D. L. & Brown, F. (eds)(1991). Classification and nomenclature of viruses. Fifthreport of the International Committee on Taxonomy of Viruses. Archives of Virology Supplementum 2, p244 https://talk.ictvonline.org/ictv/proposals/ICTV%205th%20Report.pdf
5. Warke, Ashwini; Stallknecht, David; Williams, Susan M.; Pritchard, Nikki; Mundt, Egbert (2008). "Comparative study on the pathogenicity and immunogenicity of wild bird isolates of avian paramyxovirus 2, 4, and 6 in chickens". Avian Pathology. 37 (4): 429–434. doi:10.1080/03079450802216645. PMID 18622861.
6. "Other Avian Paramyxovirus Infections - Poultry - Merck Veterinary Manual". Merck Veterinary Manual. Retrieved 2017-11-02.
7. Anderson, Danielle (2011). The Biology of Paramyxoviruses. ISBN 9781904455851.
8. Kim, Shin-Hee (2012). "Replication,Neurotropism and Pathogenicity of Avian Paramyxovirus Serotypes 1-9 in Chickens and Ducks". PLOS One. 7 (4): e34927. Bibcode:2012PLoSO...734927K. doi:10.1371/journal.pone.0034927. PMC 3340391. PMID 22558104.
9. Zarkov, Iv (2015). "Review of infection with avian paramyxovirus serotype 2 (APMV-2) and first results of Bulgaria" (PDF).
10. Subbiah, Madhuri; Xiao, Sa; Collins, Peter L.; Samal, Siba K. (2008-10-01). "Complete sequence of the genome of avian paramyxovirus type 2 (strain Yucaipa) and comparison with other paramyxoviruses". Virus Research. 137 (1): 40–48. doi:10.1016/j.virusres.2008.05.012. PMC 2700353. PMID 18603323.
11. "Paramyxovirus Entry (PDF Download Available)". ResearchGate. Retrieved 2017-11-02.
12. Wang, Xiao-Jia; Bai, Ya-Duo; Zhang, Guo-Zhong; Zhao, Ji-Xun; Wang, Ming; Gao, George F. (April 2005). "Structure and function study of paramyxovirus fusion protein heptad repeat peptides". Archives of Biochemistry and Biophysics. 436 (2): 316–322. doi:10.1016/j.abb.2005.02.004. PMC 7094221. PMID 15797244.
13. Noton, Sarah L.; Fearns, Rachel (2015-05-01). "Initiation and regulation of paramyxovirus transcription and replication". Virology. 60th Anniversary Issue. 479-480 (Supplement C): 545–554. doi:10.1016/j.virol.2015.01.014. PMC 4424093. PMID 25683441.
14. Pantua, Homer D.; McGinnes, Lori W.; Peeples, Mark E.; Morrison, Trudy G. (2006-11-01). "Requirements for the Assembly and Release of Newcastle Disease Virus-Like Particles". Journal of Virology. 80 (22): 11062–11073. doi:10.1128/JVI.00726-06. ISSN 0022-538X. PMC 1642154. PMID 16971425.
15. Alexander, D.J (2000). "Newcastle disease and other avian paramyxoviruses" (PDF). Revue Scientifique et Technique (International Office of Epizootics). 19 (2): 443–62. PMID 10935273.