AGCS family

Members of the Alanine or Glycine:Cation Symporter (AGCS) Family (TC# 2.A.25) transport alanine and/or glycine in symport with Na+ and or H+.

Alanine/glycine:cation symporter (AGCS) family protein
Identifiers
SymbolA3P053
PfamPF01235
InterProIPR001463
PROSITEPS00873

Structure and function

Known proteins in the AGCS family are between 445 and 550 amino acyl residues in length and possess 8 to 12 putative transmembrane α-helical spanners. Members may possess 11 transmembrane segments (TMSs), as seems to be true for DagA (TC# 2.A.25.1.1) and AgcS (TC# 2.A.25.1.3), although Acp (TC# 2.A.25.1.2) has only 8 TMSs, perhaps the result of truncation. As of early 2016, there does not appear to be any 3D crystal structure data available for these proteins. Members of the AGCS family have been found in bacteria and archaea, such as extremophile halotolerant cyanobacterium Aphanothece halophytica, and thermophilic bacteria, Bacillus PS3.[1][2] As of 2015, only three members of the family have been functionally characterized. These proteins show limited sequence similarity in the APC family (TC# 2.A.3).[3] As of early 2016, there do not appear to be any crystal structures available for members of the AGCS family.

Transport reaction

The generalized transport reaction catalyzed by the AGCS family is:[3]

alanine or glycine (out) + Na+ or H+ (out) → alanine or glycine (in) + Na+ or H+ (in).

Proteins in the AGCS family

There are currently 10 proteins belonging to the AGCS family. These proteins and their descriptions can be found in the Transporter Classification Database.

gollark: LyricLy iterates over all possible patterns and sees which ones match.
gollark: Wait, are we counting the 3 as one of the digits or not?
gollark: It's definitely 8. I checked.
gollark: I have it now, I'm just generating suspense.
gollark: Too bad.

References
  1. Bualuang A, Kageyama H, Tanaka Y, Incharoensakdi A, Takabe T (2015). "Functional characterization of a member of alanine or glycine: cation symporter family in halotolerant cyanobacterium Aphanothece halophytica". Bioscience, Biotechnology, and Biochemistry. 79 (2): 230–5. doi:10.1080/09168451.2014.968091. PMID 25421789.
  2. Kanamori M, Kamata H, Yagisawa H, Hirata H (March 1999). "Overexpression of the alanine carrier protein gene from thermophilic bacterium PS3 in Escherichia coli". Journal of Biochemistry. 125 (3): 454–9. doi:10.1093/oxfordjournals.jbchem.a022308. PMID 10050032.
  3. Saier MH. "2.A.25 The Alanine or Glycine:Cation Symporter (AGCS) Family". Transporter Classification Database. Saier Lab Bioinformatics Group / SDSC.

Further reading
  • Rodionov DA, Hebbeln P, Eudes A, ter Beek J, Rodionova IA, Erkens GB, Slotboom DJ, Gelfand MS, Osterman AL, Hanson AD, Eitinger T (January 2009). "A novel class of modular transporters for vitamins in prokaryotes". Journal of Bacteriology. 191 (1): 42–51. doi:10.1128/JB.01208-08. PMC 2612444. PMID 18931129.
  • Kamata H, Akiyama S, Morosawa H, Ohta T, Hamamoto T, Kambe T, Kagawa Y, Hirata H (October 1992). "Primary structure of the alanine carrier protein of thermophilic bacterium PS3". The Journal of Biological Chemistry. 267 (30): 21650–5. PMID 1400476.

As of this edit, this article uses content from "2.A.25 The Alanine or Glycine:Cation Symporter (AGCS) Family", which is licensed in a way that permits reuse under the Creative Commons Attribution-ShareAlike 3.0 Unported License, but not under the GFDL. All relevant terms must be followed.


This article is issued from Wikipedia. The text is licensed under Creative Commons - Attribution - Sharealike. Additional terms may apply for the media files.