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"Focus follows mouse" or "sloppy focus" is a feature common to X11 window managers on Linux/Unix, including GNOME, KDE, CDE, XFCE and window managers like Enlightenment, Fluxbox and Window Maker. It is also available via TweakUI on Windows. Some individual applications on OS X, like iTerm support it.
What is it? Simply put, the window where the mouse pointer is has focus, rather than having to click a window for it to gain focus.
Does the native GUI for OS X support this, with some hidden setting?
In case someone is wondering the same thing as @BenjaminDobson and, one of the biggest things this allows is to decouple the window focus and the window raise (putting it on top). It may seem strange, but once you are used to it, the ability to type in a window that isn't "on top" is huge. If part of the window with which you are interacting can be covered by a window displaying information to which you are actively referring, it allows dramatically fewer clicks, movements, and keyboard-mouse-keyboard switches for many common tasks. – derekv – 2016-02-10T15:30:43.643
Why do you want this? (I know that sounds a bit mean, but I'm curious.) – Benjamin Dobson – 2009-08-21T18:30:40.617
9Its a feature of X11 I've used for many (~15) years on Linux systems, and its nice to just bump the mouse over to another window. – jtimberman – 2009-08-21T18:52:22.820
Eewwh! Your business, of course, but first thing I do on setting up a new (to me) WM in X is find the click-to-focus option. – dmckee --- ex-moderator kitten – 2009-08-22T01:06:06.543